101. Genome.gov | National Human Genome Research Institute Manages the Human genome Project for the National Institutes of Health. Features a range of information on the project and includes genomic resources, a glossary, and workshops and conferences. http://www.nhgri.nih.gov

triggerParms["cpp_5"] = "Referer:"+ cppUrlPatch (""); // Optional Home About NHGRI Newsroom Staff Research ... The Use of Racial, Ethnic, and Ancestral Categories in Human Genetics Research An overview article published online in the August 29th issue of the American Journal of Human Genetics . NHGRI's Race, Ethnicity and Genetics Working Group takes an in-depth look at the societal impact of using racial, ethnic and ancestral categories in genetics research. Learning About Progeria Read about progeria and NHGRI's new groundbreaking research on this rare, childhood genetic disease that causes dramatic, premature aging. Read the Research Inhibiting farnesylation of progerin prevents the characteristic nuclear blebbing of Hutchinson-Gilford progeria syndrome From Proceedings of the National Academy of Sciences , September 6 issue. All About the Human Genome Project Read the story behind the Human Genome Project, the NHGRI-led, international research effort that sequenced all of the genes in a human being, revealing our complete genetic blueprint and opening a new and exciting world of research in genetics and genomics. The National Human Genome Research Institute led the Human Genome Project for the National Institutes of Health, which culminated in the completion of the full human genome sequence in April 2003. Now, NHGRI moves forward into the genomic era with research aimed at improving human health and fighting disease.

102. The Dictyostelium Genome Sequencing Project At Baylor College Of Medicine International effort to determine the complete genetic composition of this simple eukaryote. Incorporates mapping data, sequencing resources, and an overview of extrachromosomal elements. http://dictygenome.bcm.tmc.edu/

Interested in a T-shirt? The Project Background Information DictyEnsembl ... Feedback NEWS: The Dictyostelium genome has been published in Nature (5 May 2005). click here to learn more Learn more about Dictyostelium Tools for scientists About the Project What is Dictyostelium? About the Dictyostelium Genome Other Sequencing Resources Guide to External Sequence Analysis sites ... dictyBase (this is the primary repository of curated data about the Dictyostelium genome) Preliminary directory of Dictyostelium genes version 3(UCSD) SDSC Dicty BLAST ... Learn About the Project - Information and Status Consortium Institutions Baylor College of Medicine GSC Jena Sanger Institute LMB/MRC Northwestern University Princeton University University of Dundee Feedback The Dictyostelium Sequencing Project at Baylor College of Medicine is sponsored by The National Institutes of Health through The National Institute for Child Health and Human Development. Recommended Accessory Programs (all are free, and available for Windows and Macintosh systems): Browser that is feature compatibe with QuickTime 3 or above.

103. Tetraodon Genome Browser Sequencing project . Includes an introduction, genome characteristics, photograph album, and related resources. http://www.genoscope.cns.fr/externe/tetraodon/

Tetraodon Genome Browser Genoscope Home Tetraodon Project Browser Blat-Search ... Contact Search by position or name Search using a sequence name, gene name, locus, or other landmark. The wildcard character * is allowed Search : Displays : region of chromosome 4 from 545844 to 565843 region of chromosome 21 from 2986000 to 3054500 or region of scaffold with identifier 9425 region of Genoscope annotation with identifier GSTENG00031660001 region of cDNA with identifier CR648726 region where a match is found with the IPI protein IPI00017367 HOXA* all HoxA genes annotations all cytokine genes annotations Human genes (download) Tetraodon predicted peptides were mapped on the human goldenpath, and gene models were build on the human sequence using Gaze. We found 904 gene models which do not overlap any known annotations ( Ensembl Swiss-Prot ... MGC and Vega ). See for instance these examples : Browse a chromosome The centromere is in black, and the chromosome coverage is shown in blue. Assembly summary (download) Number N50 length (kb) Coverage of the genome Contigs Supercontigs Ultracontigs Mapped ultracontigs Annotation summary (download) Annotated genes Annotated transcripts Average number of coding exons per gene Average number of UTR exons per gene Average gene size (bp) Average CDS size (bp) Average exon size (bp) About the Tetraodon project This Tetraodon genome sequence analysis results from a collaboration between Genoscope and the Broad Institute of MIT and Harvard . The sequence data was generated by both institutes and the assembly was performed using the

104. CGAP Determine the gene expression profiles of normal, precancer, and cancer cells. Includes human and mouse genome data, information on methods and resources for reagents, and informatics tools. http://cgap.nci.nih.gov/

CGAP HOW TO CGAP Info Educational Resources Slide Tour Team Members References CGAP Data Download Quick Links: ICG NCI Home NCICB Home NCBI Home ... OCG window.name = "CGAP"; The C ANCER G ENOME A NATOMY P ROJECT The goal of the NCI's Cancer Genome Anatomy Project is to determine the gene expression profiles of normal, precancer, and cancer cells, leading eventually to improved detection, diagnosis, and treatment for the patient. By collaborating with scientists worldwide, CGAP seeks to increase its scientific expertise and expand its databases for the benefit of all cancer researchers. The CGAP Web Site Interconnected modules provide access to all CGAP data, bioinformatic analysis tools, and biological resources allowing the user to find "in silico" answers to biological questions in a fraction of the time it once took in the laboratory. Genes Gene information, clone resources, SNP500Cancer, GAI, and transcriptome analysis Chromosomes FISH-mapped BAC clones, SNP500Cancer, and the Mitelman database of chromosome aberrations Tissues cDNA library information, methods, and EST-based gene expression analysis

105. Gene Therapy Definition, hurdles, ethical issues, and links to more resources on gene therapy provided by the Oak Ridge National Laboratory. http://www.ornl.gov/sci/techresources/Human_Genome/medicine/genetherapy.shtml

Human Genome Project Information Genomics:GTL Microbial Genome Program home ... skip navigation Gene Therapy Subject Index Send the url of this page to a friend News What's New Meetings Calendar Media Guide Basic Information FAQs Glossary Acronyms Links ... Publications About the Project What is it? Goals Progress History ... Genetics 101 the New Genetics Home Gene Testing Gene Therapy Pharmacogenomics ... Genetic Counseling Ethical, Legal, Social Issues Home Privacy Legislation Gene Testing Patenting ... Genetics in Courtroom Education Teachers Careers Students Webcasts Audio/Video ... Genética Websites en Español Research Home Sequencing Instrumentation Mapping ... Funding Publications Human Genome News Chromosome Poster Primer Molecular Genetics To Know Ourselves ... List of All Publications Search This Site Contact Us Privacy Statement Site Stats and Credits Quick Links to this page What is gene therapy? How does gene therapy work? What is the current status of gene therapy research? What factors have kept gene therapy from becoming an effective treatment for genetic disease? ... Gene therapy links What is gene therapy? Gene therapy is a technique for correcting defective genes responsible for disease development. Researchers may use one of several approaches for correcting faulty genes:

106. DeRisi Lab, University Of California, San Francisco Exploits whole genome approaches to tackle problems in yeast molecular biology and human infectious disease. Includes research data, people, publications, and microarray resources. http://derisilab.ucsf.edu/

DeRisi Lab in Uganda Blog QB3 Microarray Course Pictures Cold Spring Harbor Course Pictures www.microarrays.org ... 16-Tip Deconvoluter v2.2 Promoter v2.20 (Coming soon!) more... Yeast Proteome Database Saccharomyces Genome Database MIPS Yeast Database ... Pradip Rathod, Univ. Washington Our lab exploits whole genome approaches to tackle problems in yeast molecular biology and human infectious disease. These projects can be classified into three separate areas: Functional genomics of Plasmodium falciparum , the causative agent of the deadliest form of human malaria. Learn more... Tech Museum Video Clip Whole genome approaches to the molecular biology of Saccharomyces cerevisiae Searching for a link between asthma and viral infection. The UCSF Core Facility for Genomics and Proteomics provides access to a wide range of equipment, information, protocols, and training for the UCSF campus. Equipment includes a high speed, large capacity microarrayer for nucleic acid and protein arrays, high throughput oligo synthesis, liquid handling, colony picking, and PCR machines. Do you have a genome-wide project in mind? Undoubtedly the instrumentation necessary for the job can be accessed through the Core. more...

107. MGI_3.3 - Maps And Mapping Data Menu Details genetic markers, polymorphisms and maps, links to related data available in the mouse genome database, and other resources. http://www.informatics.jax.org/menus/map_menu.shtml

Mouse Genome Informatics MGI Home Help Search for in these sections All sections Gene symbols/names Accession IDs Phenotype/Human Disease Gene Expression Gene Ontology Anatomical Dictionary Phenotype Ontology (MP) Human Disease (OMIM) Mouse Sequence Desc. Reference abstracts Strain Characteristics Mouse Locus Catalog Advanced search for... Genes/Markers Phenotypes/Alleles MLC/OMIM Polymorphisms Strains Orthology Oxford Grid Expression Data cDNA Clones Expression Refs Linkage Maps Cyto Maps Physical Maps Mapping Data Mapping Panels RI SDP RC SDP Sequences Probes/Clones References Accession IDs Search Categories All Search Tools Genes/Markers Phenotypes/Alleles Strains/Polymorphisms ... Funding Information Send questions and comments to User Support last database update MGI 3.3 Maps and Mapping Data Searches Mouse GBrowse Interactive genome map browser. Mapping Data Search by experiment type, marker symbol, chromosome, or reference. Recombinant Inbred Strain Distribution Patterns Search by RI set or chromosome. Recombinant Congenic Strain Distribution Patterns Search by RC set or chromosome. DNA Mapping Panel Data Sets Search by Mapping Panel and chromosome.

108. » Dendrome | Institute Of Forest Genetics A collection of forest tree genome databases and other genetic information resources for the international forest genetics community. http://dendrome.ucdavis.edu/

Dendrome is a collection of forest tree genome databases and other forest genetic information resources for the international forest genetics community. Dendrome is part of a larger collaborative effort to construct genome databases for major crop and forest species. TreeGenes Directory of Forest Geneticists Neale Lab Page There are currently around 70 genetic maps in TreeGenes Meetings and Courses Information on upcoming meetings, courses, abstracts, and reviews Jobs Jobs page is continously updated for the available position announcements from all over the world for the forest genetics community. Newsletters The following resources provide comprehensive lists of information available within the community including software, website, and other project information Genome Websites EST Projects Image Database Genome Software ... Populus Genome Project The primary genome database of Dendrome is called TreeGenes. TreeGenes is an ACeDB style database. It includes genetic map, DNA sequence, germplasm, and other related information for a large number of forest tree species. About TreeGenes Data Submission TreeGenes Database The Dendrome Project is a resource for the entire forest genetics community and as such its success is dependent on the participation and contributions from the community. We welcome comments and suggestions regarding further development and look forward to your submissions to the database.

109. NASC The European Arabidopsis Stock Centre Provides seed and information resources to the International Arabidopsis genome Programme and the wider research community. Includes catalog, staff profiles, protocols, and links http://nasc.life.nott.ac.uk/

About NASC Ask a Question Background lines Bioinformatics at NASC ... Historical Documents NASC The European Arabidopsis Stock Centre NASC provides seed and information resources to the International Arabidopsis Genome Programme and the wider research community. Stock Catalogue Search Catalogue Browse Catalogue About plant ontology How to Order ... MTA FAQ Transcriptomics Microarray Homepage Apply for Service AffyWatch (CDs) Getting Array Data ... GARNet Genomics Arabidopsis Ensembl InsertWatch UKCropNet AGR (we recommend Ensembl) ... RI Map Data Proteomics Proteomics database Stock Catalogue NASC now maintains over 300,000 accessions of Arabidopsis thaliana representing over half a million genotypes Donate Seed Search Catalogue Browse Catalogue Browse by Ontology Note: Linking to NASC germplasm has changed, read more here News Latest Additions to the Stock Catalogue: GABI-Kat lines - donated by Bernd Weisshaar - August 2005. AGRIKOLA: Systematic RNAi knockouts in Arabidopsis - donated by AGRIKOLA consortium - July 2005. STAIRS lines - donated by Mike Kearsey and Timothy Wilkes - March 2005. Wisconsin DsLox lines - donated by Patrick Krysan, Rick Amasino, Mike Sussman - January 21st 2005.

110. Pig EST Database Searchable database of pig reproduction ESTs . Includes summary tables and related resources. http://pigest.genome.iastate.edu/index.html

Pig Expressed Sequence Tags Database - Developing Resources for Functional Genomics News Query Database BLAST Statistics ... Data Summary Download Resouces PigBase dbEST @NCBI UniGene LocusLink ... PEDE, Japan Update EST Mapping Data: Under construction. A total of 98,988 pig EST sequences were analyzed to search for homologies among pig EST sequences and human genes using BLAST alignment against 97,1000 human UniGene sequences. The similarity among the EST sequences and pig gene sequences was also determined by BLAST alignment against 2,011 pig gene sequences from Genbank. A Java based in-silico mapping tool is being developed (testing). What is the pig EST database? Currently, the pig Expressed Sequence Tags (ESTs) database contains 2 versions: the first version contains ~14,000 EST sequences. This set of sequences was generated by the Iowa State University led Pig EST Coordination Program . The EST sequences were obtained from porcine whole embryo, term placenta, anterior pituitary, hypothalamus and ovary. The new version of pig EST database accomomdates 98,988 pig ESTs which were obtained from NCBI dbEST database, the BLAST alignment data, associated

111. Cichlid Genome Consortium Genomic resources The descriptions and links below will lead you to the genomeresearch tools already developed for studies of these fishes, http://hcgs.unh.edu/cichlid/

Genetic maps BAC libraries Physical maps cDNA libraries ... Cichlid Genetics ListServ News and updates May 12, 2005 - Malawi cichlid genomes to be sequenced at JGI. ( Press release May 11, 2005 - Cichlid Genome Update #5 ( Newsletter March 22, 2005 - Cichlid Genome Update #4 ( Newsletter February 25, 2005 - White paper submitted to JGI-CSP to sequence the tilapia genome 2005 Proposal - 5 Mb List of people submitting letters (2005; 300 kb) 74 Letters of Support (2005; 14 Mb) January 12, 2005 - Cichlid Genome Update #3 ( Newsletter November 15, 2004 - Cichlid Genome Update #2 ( Newsletter September 1, 2004 - Cichlid Genome Update #1 ( Newsletter June 7, 2004 - TIGR EST clusters released for three haplochromine cichlids ( TIGR Gene Indices Feb 20, 2004 - Whitepaper submitted to JGI Community Sequencing Program Cichlid Genome Consortium, Radcliffe Institute for Advanced Study. February 2-3, 2004. Program and .ppt Cichlid evolution symposium in Hayama JAPAN, September 2003. Program Workshop in Karuizawa JAPAN, September 2003. Abstracts (pdf) Teleost diversity The more than 20,000 species of bony fishes represent more than half of all living vertebrates. Among these, the perch-like fishes (Order Perciformes) include more than 9,300 species

112. Resources For Fungal Comparative Genomics: Annotations And Tools resources for Fungal Comparative Genomics. This website is intended to providegenome annotation data for the available fungal genomes. http://fungal.genome.duke.edu/

Resources for Fungal Comparative Genomics This website is intended to provide genome annotation data for the available fungal genomes. Additional genome annotations, homology searching, and best reciprocal orthologous genes have been generated for the available species and will be made downloadable this fall. Analyses of orthologous gene relationships, gene trees, and gene structures will follow shortly. A tree representing the phylogenetic relationships of the sequenced species is available Tools for gene comparisons are available. These include BLAST and extracting sub-sequence sequences from the genome. Latest news News feed html rss Genome annotations Ascomycota Hemiascomycota Saccharomyces cerevisiae S288C Gbrowse GFF CDS AA ... Saccharomyces Genome Database Saccharomyces cerevisiae RM11-1a Gbrowse GFF CDS AA ... Broad Institute Saccharomyces cerevisiae YJM789 Gbrowse GFF CDS AA DNA Stanford Saccharomyces paradoxus Gbrowse GFF CDS AA ... Saccharomyces Genome Database Saccharomyces mikatae Gbrowse GFF CDS AA ... Saccharomyces Genome Database Saccharomyces kudriavzevii Gbrowse GFF CDS AA ... Saccharomyces Genome Database Saccharomyces bayanus Gbrowse GFF CDS AA ... Saccharomyces Genome Database Saccharomyces castellii Gbrowse GFF CDS AA ... Saccharomyces Genome Database Candida glabrata Gbrowse GFF CDS AA ... Genolevures Kluyveromyces waltii Gbrowse GFF CDS AA ... SGD Ashbya gossypii Gbrowse GFF CDS AA ... Ashbya Genome Database Saccharomyces kluyveri Gbrowse GFF CDS AA ... Saccharomyces Genome Database Kluyveromyces lactis Gbrowse GFF CDS AA ... Genolevures Debaryomyces hansenii Gbrowse GFF CDS AA ... Genolevures Candida albicans

113. International Mammalian Genome Society Links To Resources The International Mammalian genome Society exists primarily to foster and stimulateresearch in mammalian genetics from sequencing and functional genomics http://imgs.org/links/organisms.shtml

Skip Navigation International Mammalian Genome Society News and Views Abstracts Application Form Meeting Calendar ... Home Link Lists: Organisms Organisms by County Research by County Topics ... IMGS Home Research Sites by Organism Quick Links: * Animal (General) Emus Goat Rabbit ... Pig Animal (General) Eukaryota : NCBI Taxonomy Browser ABIM Organism Databases : links to many different databases Animal Genome Size Database Caltech List of Model Organism Databases DEAMBULLUM Genomes and Organisms Encyclopedia of Life (EOL) : collaborative global project designed to catalog the complete proteome of every living species in a flexible reference system. Genetic Response to Global Warming : North American red squirrels exhibit genetic changes in response to a warming climate GenomeWeb : extensive links for genomics of various organisms GOLD[TM] Genomes OnLine Database : monitors genome sequencing projects International Mammalian Genome Society Intron Sequence and Information database (ISIS) : multiple organism nuclear intron database KEGG: Kyoto Encyclopedia of Genes and Genomes Links to Animal Genomics Research : Iowa State NIH Genome Sequencing Proposals (2005) Online Mendelian Inheritance in Animals (OMIA) PIR Non-Redundant Reference Protein Database Quick Guide to Sequenced Genomes : Sequenced genome projects from the Genome News Network.

114. Genome The genome Gateway. The gateway to genome information and resources. genome Resource A comprehensive guide to microbial and eukaryotic genome sequencing http://www.horizonpress.com/gateway/genome.html

The Genome Gateway The gateway to genome information and resources. Genome Resources on the Web Human Genome Research Human Genome Project Information Genome Research Journal dedicated to genome research Genome Research and News Genome Resource A comprehensive guide to microbial and eukaryotic genome sequencing projects Genomes and Databases Genomics Jump Station Molecular Biology Jump Station Recommended Books ... Genetics Jump Station Molecular Biology Resources Molecular Biology Highveld Molecular Biology Gateway PCR Information and links on PCR PCR Protocols Real-Time PCR Open Access Molecular Biology Papers The Genome Gateway ... New Molecular Biology Sites Other resources: Overseas Property Holiday Accommodation Apartment in Spain French Property Featured books: Epstein Barr Virus Cytomegaloviruses Papillomavirus HIV Chemotherapy ... Foodborne Pathogens

115. Mycology Resources Fungal Molecular Genetics Fungal genome Resource. Physical maps of Aspergillus nidulans and information onODS physical mapping software for Solaris and Windows systems can be found http://biodiversity.uno.edu/~fungi/fgenetic.html

116. FGR Homepage A repository of information and services to assist the fungal genomics community.Includes physical maps, sequence data, ongoing projects, http://gene.genetics.uga.edu/

Fungal Genome Resource Physical Maps Aspergillus nidulans Chromosome I II III IV ... VIII Neurospora crassa Linkage group I II III IV ... VII Nectria haematococca Chromosome MP VI MAK1 Pneumocystis carinii genome Sequence Data BLAST search against our sequences. Download sequence data. Browse Neurospora Pneumocystis A. flavus Cosmids Cosmid ends ESTs Fetch sequence from Neurospora Pneumocystis A. flavus clone Search annotation of All organisms Neurospora Pneumocystis A. flavus All sequences Cosmids Cosmid ends ESTs for keyword Internal Pneumocystis mapping and sequencing project Announcements 7th International Workshop on Opportunistic Protists NSF Science and Technology Center Proposal Home page Management Plan Ongoing Projects Workflow Application for Genomics Database for Genomics Computing Life Journals Fungal Genetics and Biology Outside Links Fungal Genetic Stock Center Candida Genome Database UNM ... Genome Project Miscellaneous Document Archives Contact Us Dr. Jonathan Arnold Phone: 706-542-1449 Email: arnold@uga.edu Web Guy Site powered by

117. PlasmoDB: The Plasmodium Genome Resource Provides access to finished sequence for Plasmodium falciparum (strain 3D7),generated by the Sanger Institute, TIGR/NMRC, and Stanford, in addition to a http://plasmodb.org/

Release 4.4 Click here for a summary of resources available through PlasmoDB and information on how to cite the data provided on this site. Please be sure to provide appropriate acknowledgement to the scientists who have made their data available through PlasmoDB. Did you know document.write(""); Welcome to PlasmoDB 4.4. Please note that because of ongoing database work, the facility for submitting new user comments will be intermittently unavailable. We apologize for the inconvenience. Home Downloads Tools Queries ... Help Latest News: PlasmoDB 4.4 Released Literature Relevance Tool Allows User Submissions More News ... Quick Links: Discussion Forum Community discussion, user feedback, etc. Tutorials: FAQ news bug list ... tutorial , etc. Queries: Query PlasmoDB for genes based on specific features, then combine results using the query history Tools: A collection of sequence analysis tools including BLAST Downloads: Download nucleotide and amino acid sequences including a sequence retrieval tool, SRT PubMed Crawler: PubMed publications related to malaria.

118. UK CropNet, Arabidopsis Genome Resource (AGR) WebAce allows for more flexibility when viewing images (you can scroll and resizeimages). Arabidopsis genome Resource maintained by http://ukcrop.net/agr/

About Projects Software Databases ... Help Quick database access: Select DB AGR BarleyDB BrassicaDB CropSeqDB FoggDB MilletGenes AlfaGenes BeanGenes CassavaDB CompositDB CoolGenes CottonDB DictyDB EcoSys EthnobotDB FoodplantDB GrainGenes Mendel-ESTs Mendel-GFDb MPNADB PhytochemDB RiceBlastDB RiceGenes SolGenes SorghumDB SoyBase Did you know? Arabidopsis Genome Resource (AGR) Quick search AGR... Type in a relevant keyword or phrase, e.g. 'auxin', 'RNA helicase', 'lax2', 'Bennett', 'homeobox protein' AGR is a database developed at NASC using the ACEDB database system. Sequences, maps, and other information has been combined to form a large and powerful information resource. To start exploring AGR, use the search box above or select a link from below: about AGR accessing AGR AGR help AGR sequences ... other AGR data ~ AGR news ~ The Final rebuild of the AGR Database - 20/03/03. Please note: AGR is no longer being maintained. The final update of the database took place in March 2004. Please visit Arabidopsis Ensembl - Arabidopsis.info's (NASC) new genomic resource. More AGR news...

119. FGR Homepage The Fungal genome Resource has moved. Please click on the following linkhttp//gene.genetics.uga.edu or stay put and wait to be transfered. http://fungus.genetics.uga.edu:5080/

We have moved! The Fungal Genome Resource has moved. Please click on the following link http://gene.genetics.uga.edu or stay put and wait to be transfered. Be sure to update your bookmarks.

120. Saccharomyces Genome Database genome Snapshot New papers added to SGD this week. View genomewide Analysispapers in SGD. Do a literature search. Table of Gene Summary Paragraphs (new http://www.yeastgenome.org/

Quick Search: Site Map Help Full Search Contact SGD ... and more SGD TM is a scientific database of the molecular biology and genetics of the yeast Saccharomyces cerevisiae, which is commonly known as baker's or budding yeast. New and Noteworthy SGD Curation News Genome Snapshot New papers added to SGD this week. View Genome-wide Analysis papers in SGD. Do a literature search Table of Gene Summary Paragraphs (new ones highlighted yellow). Table of Community Annotations Transcription Factor Data Added A new "Regulatory Role" section has been added to the locus pages for many known transcriptional regulators. This section displays DNA-binding motifs for these transcription factors and provides links to predicted regulatory modules in which they may be involved [as predicted by Segal et al. (2003) ] . DNA-binding sites for 102 transcriptional regulators [as mapped by Harbison et al.(2004) ] have also been added as a "Regulatory regions and binding sites" track to the GBrowse map viewer, and an expanded thumbnail of this viewer now appears in the "Sequence Information" section of the locus page. The GFF file for these binding sites is available from the ftp site. Please see the

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