41. Grass Mapping Projects - North America Framework maps will be constructed for the conserved regions in the PR 9301TO 9312 This grant facilitates the comparative genome mapping of the crops http://www.nal.usda.gov/pgdic/Map_proj/grass.html

42. Secalemontanum The references listed below are from the Biological Abstracts database genome 39(3) 513519. Inst. agric. Biotechnology, Russian Acad. agric. http://www.newcrops.uq.edu.au/listing/secalemontanum.htm

Listing of Useful Plants of the World [formerly Listing of Potential New Crops for Australia] NOTICE: Information on the background to this Listing is available. The analysis of numbers of papers/mentions over time was completed in 1997, using the Agricola database (1970-1996). Hard copies of the Listing (553 pages; over 4200 new crops listed with the analyses of numbers of papers over time included) are available from the publisher, Dr Rob Fletcher; see Advice on Publications Available The references listed below are from the Biological Abstracts database (1988-2000) and are courtesy of SilverPlatter Information. For more information re Silverplatter, go to www.silverplatter.com Secale montanum Analysis of numbers of papers/mentions over time (Agricola database 1970-1996): Source: AGRICOLA database (1970-1996) Common Name(s): mountain rye Crop Use(s): cereal Reference Source(s): douglas Number of Papers/Mentions: References Biological Abstracts 1988-2000 [These references are from the Biological Abstracts database and are courtesy of SilverPlatter Information. For more information re SilverPlatter, go to www.silverplatter.com

43. Bioline International Official Site (site Up-dated Regularly) Genetic maps are being extensively used in studies of genome organization andthe dissection of The Medicago genome initiative a model legume database. http://www.bioline.org.br/request?jb03102

44. IPK - Gene And Genome Mapping With the approach termed ‘genetical genomics’ we plan to map QTLs that affect the J. agric. Food Chem. 53, 20702075. LI, JZ, XQ HUANG, F. HEINRICHS, http://www.ipk-gatersleben.de/en/02/04/03/

You are here: IPK (english) Departments and Research Groups Cytogenetics Gene and Genome Mapping Research Group: Gene and Genome Mapping Department: Cytogenetics Research Interest Recent References Staff ... Keywords Head: Tel: Fax: Email: roder@ipk-gatersleben.de Research Interest Dissection of quantitative traits into single Mendelian genes The advanced backcross strategy was employed to map quantitative characters (QTL) for agronomically important traits, such as yield, plant height, grain weight, grain number, days to flowering etc. in various backcross populations of barley and wheat (Huang et al. 2003; Huang et al. 2004; Li et al. 2005). For heritable QTLs nearly isogenic lines (NILs) with defined introgressions are developed by further backcrossing which allow the dissection of QTLs into single Mendelian genes. This strategy will enable us to dissect complex traits which are inherited by several genes into their single components for a further detailed molecular analysis. Map-based cloning of resistance gene in barley Scald is a fungal disease in barley caused by Rhynchosporium secalis with economic importance in temperate climate. The resistance gene

45. Issues In S And T, Summer 2001, Patenting Agriculture was upheld early in 2000 in an appellate case, Pioneer vJEM agric. In thissystem, a company that creates a substantial database or map of a genome http://www.issues.org/issues/17.4/p_barton.htm

Global Food Fight JOHN H. BARTON PETER BERGER Patenting Agriculture An intense drive to patent agricultural biotechnologies may hurt those who would benefit most: people in developing countries. More than one million children die each year because of a chronic lack of vitamin A. Millions more suffer disease. Many of these children live in developing nations where rice is the main staple. To help solve this problem, scientists have genetically engineered a variety of rice that is rich in beta carotene, an important source of vitamin A. Dubbed golden rice because of its yellow color, it could help improve millions of lives in developing countries, as well as improve the nutrition of legions of people in developed countries. But a careful study shows that anyone wanting to produce golden rice might have to secure licenses for more than 30 groups of patents issued to separate entities. These research institutions are now facing increasingly pervasive ownership of intellectual property rights. Simply to conduct research, the centers must consider the risk of infringing patents. This is a situation in which the patent system has worked to encourage private research but has at the same time greatly complicated crucial applications of the new technology. The problem goes much further than the legal scope of patents. Universities in developed nations, such as U.S. land grant universities, which are so critical to healthy U.S. agriculture and which for decades have collaborated closely with CGIAR and developing world research institutions, are themselves pursuing intellectual property rights. As a result, they may refocus their research away from developing-world needs. Furthermore, out of fear of offending their developed-world donors, the international research institutions may be hesitant to use technologies patented by private firms in those nations, even though the technologies are unpatented in the developing nations.

46. Science -- Sign In ZY Dai, BH Zhao, XJ Liu (in Chinese), Jiangsu agric. Sci. 4, 13 (1997). Development of genomeWide DNA Polymorphism Database for Map-Based Cloning of http://www.sciencemag.org/cgi/content/full/296/5565/79

You do not have access to this item: Full Text : Yu et al., A Draft Sequence of the Rice Genome (Oryza sativa L. ssp. indica), Science You are on the site via Free Public Access. What content can I view with Free Public Access If you have a personal user name and password, please login below. SCIENCE Online Sign In Options For Viewing This Content User Name Password this computer. Help with Sign In If you don't use cookies, sign in here Join AAAS and subscribe to Science for free full access. Sign Up More Info Register for Free Partial Access including abstracts, summaries and special registered free full text content. Register More Info Regain Access to a recent Pay per Article purchase Need More Help? Can't get past this page? Forgotten your user name or password? AAAS Members activate your FREE Subscription

47. An Integrated Physical And Genetic Map Of The Rice Genome -- Chen Et Al. 14 (3): genome sequencing data also were integrated into the rice physical map. Comparison ofthe genetic and J. agric. Genomics 5, (www.ncgr.org/research/jag). http://www.plantcell.org/cgi/content/full/14/3/537

HOME HELP FEEDBACK SUBSCRIPTIONS ... TABLE OF CONTENTS QUICK SEARCH: [advanced] Author: Keyword(s): Year: Vol: Page: This Article Abstract Full Text (PDF) Alert me when this article is cited ... Alert me if a correction is posted Services Related articles in Plant Cell Similar articles in this journal Similar articles in ISI Web of Science Similar articles in PubMed ... Cited by other online articles Search for citing articles in: ISI Web of Science (73) PubMed PubMed Citation Articles by Chen, M. Articles by Wing, R. A. Agricola Articles by Chen, M. Articles by Wing, R. A. American Society of Plant Biologists GENOMICS ARTICLE An Integrated Physical and Genetic Map of the Rice Genome Mingsheng Chen ,a Gernot Presting ,a W. Brad Barbazuk ,b Jose Luis Goicoechea a Barbara Blackmon a Guangchen Fang a Hyeran Kim a David Frisch a Yeisoo Yu a Shouhong Sun a Stephanie Higingbottom a John Phimphilai a Dao Phimphilai a Scheen Thurmond a Brian Gaudette a Ping Li b Jingdong Liu b Jamie Hatfield a Dorrie Main a Kasey Farrar a Caroline Henderson a Laura Barnett a Ravi Costa a Brian Williams a Suzanne Walser a Michael Atkins a Caroline Hall c Muhammad A. Budiman

48. Genome Relationships: The Grass Model In Current Research -- Devos And Gale 12 ( (1999) A maize map standard with sequenced core markers, grass genome referencepoints agric. Exp. Stn. Res. Bull. 572159. Tarchini, R., Biddle, P., http://www.plantcell.org/cgi/content/full/12/5/637

HOME HELP FEEDBACK SUBSCRIPTIONS ... TABLE OF CONTENTS QUICK SEARCH: [advanced] Author: Keyword(s): Year: Vol: Page: This Article Abstract Full Text (PDF) Alert me when this article is cited ... Alert me if a correction is posted Services Similar articles in this journal Similar articles in ISI Web of Science Similar articles in PubMed Alert me to new issues of the journal ... Cited by other online articles Search for citing articles in: ISI Web of Science (107) PubMed PubMed Citation Articles by Devos, K. M. Articles by Gale, M. D. Agricola Articles by Devos, K. M. Articles by Gale, M. D. GENOMICS ARTICLE Genome Relationships: The Grass Model in Current Research Katrien M. Devos a and Mike D. Gale a a John Innes Centre, Norwich Research Park, Colney, Norwich NR4 7UH, United Kingdom Correspondence to: Katrien M. Devos, (E-mail), 44-1603-450024 (fax) INTRODUCTION TOP INTRODUCTION GENOME COMPARISONS: FROM MAPS... ORGANIZATION OF THE WHEAT... MODEL PLANTS VERSUS CROP... REFERENCES Ten years ago, with the advent of comparative mapping, a new

49. Integration Of Cot Analysis, DNA Cloning, And High-Throughput Sequencing Facilit A highdensity 2399-locus genetic map of Sorghum. Plant Anim. genome VIII Conf . J. agric. Genomics 5 www.ncgr.org (also available at http://www.genome.org/cgi/content/full/12/5/795

QUICK SEARCH: [advanced] Author: Keyword(s): Year: Vol: Page: Published online before print April 12, 2002, 10.1101/gr.226102 This Article Abstract Full Text (PDF) Supplemental Research Data All Versions of this Article: GR-2261Rv1 most recent Alert me when this article is cited Alert me if a correction is posted Citation Map Services Email this article to a friend Similar articles in this journal Similar articles in PubMed Alert me to new issues of the journal ... Cited by other online articles PubMed PubMed Citation Articles by Peterson, D. G. Articles by Paterson, A. H. Vol. 12, Issue 5, 795-807, May 2002 LETTER Integration of Cot Analysis, DNA Cloning, and High-Throughput Sequencing Facilitates Genome Characterization and Gene Discovery Daniel G. Peterson

50. MaizeGDB, The Community Database For Maize Genetics And Genomics The Maize Genetics and Genomics Database (MaizeGDB) is a central repository for Since the first maize linkage maps were compiled and published in 1935, http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=308746

51. Plant Genome II Abstracts THE BARLEY genome MAP BASED ON THE STEPTOE X MOREX CROSS A. Kleinhofs, A. Kilian, Douglas W. Bigwood, Database Manager, Plant genome Database, http://www.intl-pag.org/2/

Plant Genome II Abstracts Plant Genome II, January 1994 Plant Genome II Abstracts: Table of Contents TRACKING DOWN ANCIENT PLANT TRANSPOSONS: ELUCIDATION OF MOBILE ELEMENT INVOLVEMENT IN GENOME EVOLUTION. Thomas E. Bureau, Shawn E. White and Susan R. Wessler, Department of Botany/Genetics, University of Georgia, Athens, GA 30602 (email: BLTREAUT@BSCR.UGA.EDU). INTEGRATING LIPID METABOLISM INTO THE GENOME Tom Cheesbrough, Biology/Microbiology Dept., South Dakota State University, Brookings, SD 57007 MAPPING ENABLES SERENDIPITY. Edward H. Coe, ARS-USDA and Dept. of Agronomy, Curtis Hall, University of Missouri, Columbia, MO 65211. GENETIC ENGINEERING OF WHEAT. Kutty K. Kartha, Ravindra N. Chibbar and Narender S. Nehra, Plant Biotechnology Institute, National Research Council of Canada, 110 Gymnasium Road, Saskatoon, Saskatchewan, Canada, S7N 0W9. SIMPLE SEQUENCE REPEAT DNA MARKERS FOR GENOME MAPPING AND GENOTYPE IDENTIFICATION. Perry B. Cregan, Mahinur S. Akkaya, Jiang Rongwen, Soybean and Alfalfa Research Lab, USDA, ARS, Beltsville, MD 20705, Arvind A. Bhagwat, Dept. of Agronomy, University of Maryland, College Park, MD 20742; and Uri Lavi, Inst. of Horticulture, ARO, The Volcanic Center, Bet-Dagan, Israel. ARABIDOPSIS WORKSHOP, TUES JAN 25TH 3:30-6:00PM

52. CUGI - Publications GDR genome Database for Rosaceae integrated web resources for Rosaceae genomicsand An Integrated Physical and Genetic Map of the Rice genome. http://www.genome.clemson.edu/publications/

Home Clemson News About ... Webmail Publications Cuthbertson, B., J. Rickey, Y. Wu, G. Powell, and J. Tomkins. 2005. Exploitation of the daylily petal senescence model as a source for novel proteins that regulate programmed cell death in plants. Y. Blume (editor). In NATO Cell Death Monograph. NATO ASI Series in Cell Biology (In Press). Wang, W., M. Tanurdzic, M. Luo, N. Sisneros, H. Kim, J. Weng, D. Kudrna, C. Mueller, K. Arumuganathan, J. Carlson, C. Chapple, C. dePamphilis, D. Mandoli, J. Tomkins, R. Wing, and J. Banks. 2005. Construction of a bacterial artificial chromosome library from the spikemoss Selaginella moellendorffii: A resource for plant comparative genomics. BMC Plant Biology (In Press). Margulies, E.H. NISC Comparative Sequencing Program, V.V. Maduro, P. J. Thomas, J.P. Tomkins, C.T. Amemiya, M. Luo, and E.D. Green. 2005. Comparative sequencing provides insights about the structure and conservation of marsupial and monotreme genomes. Proceedings of the National Academy of Sciences USA (PNAS). 102:3354-3359. Wood, T.C. and J.P. Tomkins. 2004.

53. A Maize Map Standard With Sequenced Core Markers, Grass Genome Reference Points We have constructed a 1736locus maize genome map containing1156 loci probed bycDNAs, Maize genome Database (http//www.agron.missouri.edu). http://www.genetics.org/cgi/content/full/152/3/1137

HOME HELP FEEDBACK SUBSCRIPTIONS ... TABLE OF CONTENTS This Article Abstract Full Text (PDF) Alert me when this article is cited ... Alert me if a correction is posted Services Similar articles in this journal Similar articles in PubMed Alert me to new issues of the journal Download to citation manager ... Cited by other online articles PubMed PubMed Citation Articles by Davis, G. L. Articles by Coe, E. H., , Jr. A Maize Map Standard With Sequenced Core Markers, Grass Genome Reference Points and 932 Expressed Sequence Tagged Sites (ESTs) in a 1736-Locus Map G. L. Davis ,a , M. D. McMullen a , C. Baysdorfer b , T. Musket c , D. Grant ,d , M. Staebell ,d , G. Xu a , M. Polacco a , L. Koster d , S. Melia-Hancock c , K. Houchins a , S. Chao ,c , and E. H. Coe, Jr. a a USDA-ARS, Midwest Area, Plant Genetics Research Unit, Columbia, Missouri 65211, b Department of Biological Sciences, California State University, Hayward, California 94542, c Department of Agronomy, University of Missouri, Columbia, Missouri 65211 d Pioneer Hi-Bred International Inc., Johnston, Iowa 50131

54. Research Projects PGML reference database. Cereal Crosslink genome Center. We have made theworlds most detailed molecular map of the cotton genome, and applied the map http://www.plantgenome.uga.edu/projects.htm

HOME SEARCH CONTACT Projects ... UGA Links Partner Programs: Genes for Georgia NSF BAC Program Institute for Bioinformatics Arizona Genomics Institute ... Cross-cutting topics Sorghum Sorghum (Sorghum bicolor L. Moench.) is a leading cereal in arid and semi-arid agriculture, ranking fifth in importance among the worlds grain crops (Doggett 1988). Introduced into the US about 150 years ago, sorghum is grown on 10-14 million acres with a farm-gate value of $1.3-1.6 billion/yr. Sorghum is unusually tolerant of low input levels, essential in areas such as the US Southern Plains that receive too little rainfall for other grains. Increased demand for limited fresh water supplies, coupled with global climatic trends, suggest that dryland crops such as sorghum will be of growing importance. We have made the worlds most detailed molecular map of the sorghum genome, and applied the map to gaining better understanding of many traits important to domestication and improvement of sorghum. Some present activities include: Building a physical map of sorghum that is suitable as a framework for sequencing the sorghum genome Taking advantage of the small and well-characterized sorghum genome to better understand the genomes of more complex and less well-characterized grasses such as sugarcane, bermudagrass, and buffelgrass

55. Publications - Yn The Arabidopsis genome Initiative (2000) Analysis of the genome sequence of a www database containing the complete nucleotide sequence of the genome of http://www.kazusa.or.jp/~yn/jp/?Publications

56. GIW 99 Program S06 NEXTDB The Expression Pattern Map Database for C. elegans, Tadasu Shini, P28 INE The Rice genome Sequence Database, Yoshiyuki Mukai, http://giw.ims.u-tokyo.ac.jp/giw99/HomePage-Program.html

GIW '99 Program Registration Dec. 13: 16:30 - 18:30 Garden Room Dec. 14: 9:00 - 18:30 Garden Hall Dec. 15: 9:00 - 18:00 Garden Hall December 13, Monday, Garden Room The Anniversary Event 16:30 - 18:30 Registration at Garden Room 17:30 - 18:00 Event Presented by Japanese Society for Bioinformatics 18:00 - 18:30 Event Presented by International Society for Computational Biology 18:30 - 21:00 Reception Party and General Meeting December 14, Tuesday, Garden Hall Opening Address 9:20 - 9:30 Kiyoshi Asai (ETL) Session 1 Chair: A. Keith Dunker (Washington State University) 9:30 - 9:50 MIAX: A Novel System for Assessment of Macromolecular Interaction in Condensed Phases. 1) Description of the Interaction Model and Simulation Algorithm, Carlos A. Del Carpio Munoz, Atsushi Yoshimori 9:50 - 10:10 A Generic Criterion for Gene Recongnitions in Genomic Sequences, Chungfan Kim, Akihiko Konagaya, Kiyoshi Asai 10:10 - 10:30 Protein Threading Based on Multiple Protein Structure Alignment, Tatsuya Akutsu, Kim Lan Sim

57. GIW 99 Program Registration Dec. 13 1630 - 1830 Garden Room Tokyo) 1100 1200 Human genome Analysis and Medicine in the 21st Century, Nobuyoshi Shimizu S06 NEXTDB The Expression Pattern Map Database for C. http://giw.ims.u-tokyo.ac.jp/giw99/Program/program.txt

58. ILAR Journal Online, Volume 39(2/3) 1998: Comparative Gene Mapping The sheep genome map and its associated resources can be used to help in the ARKdb has been designed as a generic singlespecies genome database. http://dels.nas.edu/ilar_n/ilarjournal/39_2_3/39_2_3Sheep.shtml

@import "../images/journal_style.css"; @import "../images/article_style.css"; Online Issues ILAR Journal V39(2/3) 1998 Comparative Gene Mapping The Sheep Gene Map Thomas E. Broad, Diana F. Hill, Jillian F. Maddox, Grant W. Montgomery, and Frank W. Nicholas Thomas E. Broad, B.V.Sc. (Hons) M.Sc., Ph.D., is Senior Scientist in the AgResearch Molecular Biology Unit; Grant W. Montgomery, B.Ag. Sc. (Hons), Ph.D., is Program Leader of the AgResearch Molecular Biology Unit; Diana F. Hill, B.Sc., Ph.D., is Director of the Molecular Biology Unit and Associate Professor in the Department of Biochemistry, University of Otagu, Dunedin, New Zealand. Jillian F. Maddox, B.V.Sc., Ph.D., G.Dip.lnf. Sci., is Senior Research Fellow of the Centre for Animal Biotechnology, School of Veterinary Science, University of Melbourne, Parkville, Australia: and Frank W. Nicholas, B.Ag. Sc., Ph.D., is Associate Professor in the Department of Animal Science, University of Sydney, Camperdown, Australia. INTRODUCTION Since their domestication around 7000 to 9000 BC, sheep have significantly influenced the economic, social, and cultural fabric of human society. The volume entitled

59. READINGS II In FAITH And SCIENCE Also, the rapid pace of various genome programs continued with the addition ofthe one billionth base to the National genome Database. http://itest.slu.edu/theologicalview/readings2/collier.html

READINGS II in FAITH and SCIENCE SCIENCE AND TECHNOLOGY IN CLONING FROM SHEEP TO HUMANS: WHAT ARE THE POSSIBILITIES OF HUMAN CLONING? Dr. Robert J. Collier Chairman, Animal Sciences Department University of Arizona Tucson, Arizona Dr. Collier received his PhD in Dairy Science from the University of Illinois. After a career in Academia, he joined the Monsanto Company as a Science Fellow and initiated a discovery program in lactation and growth regulation. In September of 1999, he joined the faculty of the Animal Sciences Department, University of Arizona, as Professor of Environmental Physiology. He later became head of the Animal Sciences Department. Dr. Collier also serves as a consultant for Monsanto Company in livestock genomics and Aquatrophics, Inc. in the area of somatotropin biology.] Introduction History of Cloning Reproductive Technologies Gamete Collection ... Return to Theological Viewpoints INTRODUCTION Return to top of page HISTORY OF CLONING It is generally believed that animals were first domesticated around 8000 B.C., but the process of domestication continues today. For example, numerous species of fish are being domesticated every year as populations of these species in the wild decline. Additionally, world population increases demand continued fish production via aquaculture. Domestication of plants and trees also continues. Availability of orchids has grown rapidly since the ability to clone them has developed and many forests are cultivated as a cloned crop rather than a wild assemblage. The process of domestication of some species and the exclusion of others has resulted in some describing nature as a "Social Construct" which is unique to each culture.

60. Genomics Posters 2003 Previously, a physical map of the M. grisea genome was constructed using a Telomeres are poorly represented in the draft genome sequence database for http://www.fgsc.net/asil2003/GenomicsPosterAbstracts2003.htm

Genomics and Proteomics 239. The Ashbya gossypii genome: lessons learned by comparison to the Saccharomyces cerevisiae genome. S. Brachat , F. S. Dietrich , S. Voegeli1, A. Lerch , T. Gaffney and P. Philippsen Syngenta, Research Triangle Park, NC, USA. Current Address: Department of Molecular Genetics and Microbiology, Duke University Medical Centre, Durham, NC, USA. We completed the sequencing of the 9Mb genome the filamentous fungus Ashbya gossypii which encodes 4720 protein coding genes, 190 tRNA genes, 50 small RNA genes and 40-50 copies of the rRNA genes. With respect to the size and the number of genes, this represents presently the smallest genome of a free living eukaryot. Surprisingly, the protein coding genes revealed striking similarities to that of S. cerevisiae with over 95% of the A. gossypii genes sharing significant homology to S. cerevisiae genes. In addition, 90% of A. gossypii genes show both, homology and synteny, with the genome of the baker's yeast. The synteny can be described as "relaxed synteny" since the gene order in any A. gossypii

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